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Research Publications

Publications

2019:
1Pala, Z., Saxena, V., Saggu, G.S., Mani, S.K., Pareek, R.P., Kochar, S.K., Kochar, D.K., Garg, S.2019.Functional analysis of iron-sulfur cluster biogenesis (SUF pathway) from Plasmodium vivax clinical isolates. Experimental Parasitology. Vol 198 (2019): 53-62
2Pallavi, B., Singh, R.P., Jha, P.N., Chander, S., Murugesan, S., Sharma, P., Shukla, P. 2019. Green Synthesis, in-vitro Antimicrobial Evaluation, Docking, and SAR Studies of Potent Quinoline-4-Carboxylic Acids. Letters in Organic Chemistry. Vol 16(11)874
3Patel, O.P.S., Dhiman, S., Khan, S., Shinde, V.N., Jaspal, S., Srivathsa, M.R., Jha, P.N., Kumar, A. 2019. A straightforward TBHP-mediated synthesis of 2-amidobenzoic acids from 2-arylindoles and their antimicrobial activity. Organic and Bimolecular Chemistry.Vol17: 5962-5970
4Saini, H., Hakeem, I., Mukherjee, S., Chowdhury, S., Chowdhury, R. 2019 Autophagy regulated by gain of function mutant p53 enhances proteasomal inhibitor-mediated cell death through induction of ROS and ERK in lung cancer cells. Journal of Oncology. Vol 2019 (1) 1-17 Article ID 6164807
5Kanchan, S., Sharma, P., Chowdhury, S. 2019. Evolution of endonuclease IV protein family: an in silico analysis. 3Biotech 9: 168
6Jha, P.N., Gomaa, A-B., Yanni, Y.G., El-Saadany, A-EY., Stedtfeld, T.M., Stedtfeld, R.D., Gantner, S., Chai, B., Cole, J., Hashsham, S.A., Dazzo, F.B.2019. Alterations in the Endophyte-Enriched Root-Associated Microbiome of Rice Receiving Growth-Promoting Treatments of Urea Fertilizer and Rhizobium Biofertilizer. Microbial Ecology. https://doi.org/10.1007/s00248-019-01406-7
7Tamilselvi, A., Jayakumar, G.C., Sri Charan, K., Bindia, S., Deepa, P.R., Swarna, Kanth, V., Kanagaraj, J. (2019). Extraction of cellulose from renewable resources and its application in leather finishing. Journal of Cleaner Production. Vol 230:694-99
8Bhuvanasundar, R., Nareshkumar, Nagaraj, R., Singh, N.K., Coral, K., Deepa, P.R., Sulochana, K.N. 2019. Expression, purification and characterization of a biologically active and thermally stable human lysyl oxidase. Indian Journal of Biochemistry & Biophysics. Vol 56: 105-116
9Subramanian, A., Sivanesh, M., Easwaran, N., Perinkulam, D., Surianarayanan, R., Mahadevan. 2019. Understanding the biocalorimetric and respirometric behaviour of co-culture (R. eutropha, P. putida and A. vinelandii) in poly (3-hydroxybutyrate) batch production. Biochemical Engineering Journal, Online Aug 2019. https://doi.org/10.1016/j.bej.2019.107334
10Singh, V., Rao, A., Tiwari, A., Yashwanth, P., Lal, M., Dubey, U., Aich, S., Roy, B. Study on the effects of Cl and F doping in TiO2 powder synthesized by a sol gel route for biomedical applications. Journal of Physics and Chemistry of Solids 134 (2019) 262–272
11Monika M. Jangir, B. Vani, Shibasish Chowdhury (2019) Analysis of seven putative Na+/H+ antiporters of Arthrospira platensis NIES-39 using transcription pro?ling and in silico studies: an indication towards alkaline pH acclimation. Physiology and Molecular Biology of Plants. Vol 25 (5): 1175
12Runthala, A., Chowdhury, S. 2019. Refined template selection and combination algorithm significantly improves template based modelling accuracy. Journal of Bioinformatics and Computational Biology. Vol 17(02) 1950006
13Niveditha, D., Mukherjee, S., Majumder, S., Chowdhury, R.,Chowdhury S. 2019. A global transcriptomic pipeline decoding core network of genes involved in stages leading to acquisition of drug-resistance to cisplatin in osteosarcoma cells. . Bioinformatics. Vol 35(10):1701-1711
14Majumder, S., Hadden, M.J., Thieme, K., Batchu, S.N., Niveditha, D., Chowdhury, S., Yerra, V.G., Advani, S.L., Bowskill, B.B., Liu, Y., Vakili, H., Alghamdi, T.A., White, K.E., Geldenhuys, L., Siddiqi, F.S., Advani, A. (2019) Dysregulated expression but redundant function of the long non-coding RNA Hotair in diabetic kidney disease. Diabetologia. Vol 62(11): 2129
15Niveditha, D., Sharma, H., Sahu, A., Majumder, S., Chowdhury, R., Chowdhury, S. (2019) Drug tolerant cells: An emerging target with unique transcriptomic features. Cancer Informatics Vol 18: 1-5
16Niveditha, D., Sharma, H., Majumder, S, Mukherjee, S., Chowdhury, R., Chowdhury, S. 2019. Transcriptomic analysis associated with reversal of cisplatin sensitivity in drug resistant osteosarcoma cells after a drug holiday. BMC Cancer. Vol 19:1045 (2019) doi:10.1186/s12885-019-6300-2
17Fageria, L., Bambroo, V., Mathew, A., Mukherjee, S., Chowdhury, R., Pande, S. 2019. Functional autophagic flux regulates AgNP uptake and the internalized nanoparticles determine tumor cell fate by temporally regulating flux. International Journal of Nanomedicine. Vol 2019(14): 9063—9076
 
2018:
1Jha, P., Panwar, J., Jha, P.N. 2018. Mechanistic insights on plant root colonization by bacterial endophytes: a symbiotic relationship for sustainable agriculture. Environmental Sustainability. Vol 1:25-38
2Nehra, P., Khungar, B., Singh, RP., Sivasubramanian, S.C., Jha, P.N., Saini, V. 2018. Synthesis, characterization and applications of imidazolium ionic liquid-tagged zinc(II) complex. Inorganica Chimica Acta. Vol 478: 260-267
3Reddy, P.O.V., Hriday, M., Kumar, N., Khan, S., Jha, P.N., Shah, K., Kumar, D. 2018. Synthesis and investigations into the anticancer and antibacterial activity studies of β-carboline chalcones and their bromide salts. Bioorganic & Medicinal Chemistry Letters. Vol 28:1278-1282
4Agarwal, D.S., Singh, R.P., Lohitesh, K., Jha, P.N., Chowdhury, R., Sakhuja, R. 2018. Synthesis and evaluation of bile acid amides of α-cyanostilbenes as anticancer agents. Molecular Diversity. Vol 22(2):305-321
5Singh, R.P., Jha, P.N. 2018. Effect of inoculation of zinc-resistant bacterium Enterobacter ludwigii CDP-14 on growth, biochemical parameters and zinc uptake in wheat (Triticum aestivum L.) plant. Ecological Engineering. Vol 116: 163–173
6Pala, Z., Saxena, V., Saggu, G.S., Garg, S. 2018. Recent advances in the [Fe-S] Cluster Biogenesis (SUF) pathway functional in the apicoplast of Plasmodium. Trends in Parasitology.Vol 34(9):800-809
7Saggu, G.S., Garg, S., Pala, Z., Kochar, S., Saxena, V. 2018. Deciphering the role of IspD (2-C-methyl-D-erythritol 4-phosphate cytidyltransferase) enzyme as a potential therapeutic drug target against Plasmodium vivax. Gene. Vol 30(675):240-253
8Dash, S., Prasad, M.S., Balaji, R., Chowdhury, R., Mukherjee, S. 2018. TGF-β2-induced EMT is dampened by inhibition of autophagy and TNF-α treatment. Oncotarget. Vol 9:6433-6449
9Lohitesh, K., Saini, H., Srivastava, A., Mukherjee, S., Roy, A., Chowdhury R. 2018. Autophagy inhibition potentiates SAHA mediated apoptosis in glioblastoma cells by accumulation of damaged mitochondria. Oncology Reports. Vol 39(6):2787-2796
10Pasha, S.S., Fageria, L., Climent, C., Rath, P.N., Alemany, P., Chowdhury, R., Roy, A. Laskar, I.R.2018. Evaluation of a Novel Platinum (II)Based AIE Compound-Encapsulated Mesoporous Silica Nanoparticles for Cancer Theranostic Application. Dalton Transactions. 47(13):4613-4624
11Lohitesh K, Chowdhury R, Mukherjee S. 2018. Resistance a major hindrance to chemotherapy in Hepatocellular Carcinoma: An insight". Cancer Cell International. Vol (20)18:44
12Kachawal, V., Isukapalli, SVK., Fageria, L., Chaudhary, J., Roy, R.K., Chowdhury, R., Laskar I.R. 2018.Exploring the Hidden Potential of Benzothiazole Based Schiff base “AIE and ESIPT” active for pH Sensing, Intracellular Imaging and Ultrasensitive & Selective detection of Aluminium (Al3+). Analyst. Vol 143: 3741-3748
13Marathe, SA. 2018. Nesting Sites of Birds and Spiders in the Semi-Arid Zone of Rajasthan, India. Current Science. Vol 114: 1821- 1824
14Asati, V., Sharma, P.K. 2018. Using thin-layer chromatography for the metabolic characterization of an isoflavone glycoside-specific β-glucosidase in Cyamopsis tetragonoloba. Journal of Planar Chromatography - Modern TLC. Vol. 31 (2): 169-172
15Asati, V., Sharma, P.K. 2018. Identification of an isoflavone glycoside hydrolyzing β-glucosidase in the seeds of the desert legume Prosopis cineraria. Legume Research. Vol (41):837-841
16Pareek, V., Bhargava, A., Vishalakshi, Gupta, R., Jain, N., Panwar, J. 2018. Formation and characterization of protein corona around nanoparticles: A review. Journal of Nanoscience and Nanotechnology.Vol 18: 6653-6670
17Pareek, V., Gupta, R., Panwar, J. 2018. Do physico-chemical properties decide the bactericidal impact of silver species?. Materials Science and Engineering C. Vol 90: 739-749.
18Bhargava, A., Pareek, V., Roy Choudhury, S., Panwar, J., Karmakar, S. 2018. Superior bactericidal efficacy of fucose functionalized silver nanoparticles against Pseudomonas aeruginosa PAO1 and prevention of its colonization on urinary catheters. ACS Applied Materials & Interfaces. Vol 10: 29325-29337
19Ashok, P., Chander, S., Smith, T.K., Singh, R.P., Jha, P.N., Sankaranarayanana, M. 2018. Biological evaluation and structure activity relationship of 9-methyl-1-phenyl-9H-pyrido[3,4-b]indole derivatives as anti-leishmanial agents. Bioorganic Chemistry. Vol 84: 98–105
20Nandwana, N.K., Singh, R.P., Patel, OPS., Dhiman, S., Saini, H.K., Jha, P.N., Kumar, A. 2018. Design and Synthesis of Imidazo/Benzimidazo[1,2 c]quinazoline Derivatives and Evaluation of Their Antimicrobial Activity. ACS Omega. Vol 3:16338−16346
21Roth, A., Adapa, S.R., Zhang, M., Liao, X., Saxena, V., Goffe, R., Li, S., Ubalee, R., Saggu, G.S., Pala, Z.R. Garg, S., Davidson, S., Jiang, R.H.Y., Adams, J.H. 2018. Unraveling the Plasmodium vivax sporozoite transcriptional journey from mosquito vector to human host. Nature Scientific Reports. Vol 8(12183):1-29
22Kumari, N., Dubey, U., Agrawal, U. (2018). Evolution Of Classification Of Bladder (Urothelial) Cancer. National Journal Of Integrated Research In Medicine. Vol 6(6): 89-94
23Pandey, I., Kaur, R., Subudhi, A.K., Boopathi, P.A., Mugasimangalam, R.C., Rao, S.N., Aiyaz, M., Kochar, S., Kochar, D., Das, A. 2018. A tiling array-based comparative genomic hybridization approach to predict copy number variations between Plasmodium falciparum field isolates from the Indian Sub-continent. F1000Research. Vol 7:1033
24Senthil Nagappan R. Rajendra Kumar J. Rupesh Balaji Shachi Singh, Sanjay KumarVerma (2018) Direct saponification of wet microalgae by methanolic potassium hydroxide using acetone as co-solvent. Bioresource Technology Reports Vol 5; 351-354.
25Senthil Nagappan and S K Verma (2018) Co-production of biodiesel and alpha-linolenic acid (omega-3 fatty acid) from microalgae, Desmodesmus sp. MCC34 Vol 40: 2933-2920
 
2017:
1Saggu, G.S., Garg, S., Pala, Z.R., Kochar, S.K., Kochar, D.K., Saxena, V. 2017. Characterization of 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase (IspG) from Plasmodium vivax and it’s potential as an antimalarial drug target. International Journal of Biological Macromolecules.Vol 96:466–473
2Kono, T., Mehrotra, S., Endo, C., Kizu, N., Matusda, M., Kimura, H., Mizohata, E., Inoue, T., Hasunuma, T., Yokota, A., Matsumura, H., Ashida, H. 2017. A RuBisCO-mediated carbon metabolic pathway in methanogenic archaea. Nature Communications. Vol 8: 14007.
3Singh, R.P., Nalwaya, S., Jha, P.N. 2017. The draft genome sequence of the plant growth promoting rhizospheric bacterium Enterobacter cloacae SBP-8: Genome Data. DOI information: 10.1016/j.gdata.2017.03.006
4Singh, R.P., Jha, P., Jha, P.N. 2017. Analysis of fatty acid composition of PGPR Klebsiella sp. SBP-8 and its role in ameliorating salt stress in wheat. Symbiosis. Vol 73(2)
5Singh, R.P., Jha, P., Jha, P.N. 2017. Bio-inoculation of plant growth-promoting rhizobacterium Enterobacter cloacae ZNP-3 increased resistance against salt and temperature stress in wheat plant (Triticum aestivum L.). Journal of Plant Growth Regulation. 36:783–798
6Ashoka, P., Chander, S., Chow, LMC.,Wong, ILK., Singh, R.P., Jha, P.N., Murugesan, S. 2017. Synthesis and in-vitro anti-leishmanial activity of (4-arylpiperazin-1-yl)(1-(thiophen-2-yl)-9H-pyrido[3,4-b]indol-3-yl)methanone derivatives. Bioorganic Chemistry. Vol 70:100-106
7Jain, N., Bhargava, A., Pareek, V., Akhtar, M.S., Panwar, J. 2017. Does seed size and surface anatomy play role in combating phytotoxicity of nanoparticles?. Ecotoxicology.Vol 26: 238-249
8Fageria, L., Pareek, V., Dilip, R.V., Bhargava, A., Pasha, S.S., Laskar, I.R., Saini, H., Dash, S., Chowdhury, R., Panwar, J. 2017. Biosynthesized protein-capped silver nanoparticles induce ROS-dependent pro-apoptotic signals and pro-survival autophagy in cancer cells. ACS Omega. Vol 2(4): 1489-1504
9Malvia, S., Bagadi, S.A., Dubey, U.S., Saxena, S. 2017. Epidemiology of breast cancer in Indian women. Asia-Pacific Journal of Clinical Oncology. Vol 13(4):289-295
10John A, Vetrivel U, Subramanian K, Deepa PR. 2017. Comparative docking of dual conformations in human fatty acid synthase thioesterase domain reveals potential binding cavity for virtual screening of ligands. J Biomol Struct Dyn. 35:1350-1366.
11Murali, P., Deepa, P.R., Subramanyan, R., Farida Farzana, A. J., Nithya Lakshmi, M., Murali Raman. 2017. Mathematical Modeling of Coronary Artery Disease (CAD):Analysis Reveals HbA1c and Total Cholesterol to be Significant Risk Predictors. Applied Mathematics. 7(1): 1-4
12Dubey, P., Dubey, U.S., Dubey, B. 2017. Modeling the role of acquired immune response and antiretroviral therapy in the dynamics of HIV infection. Mathematics and Computers in Simulations. 144, 120-137
13Rai, A., Pradhan, P., Nagraj, J., Lohitesh, K., Chowdhury, R., Jalan, S. 2017. Understanding cancer complexome using networks, spectral graph theory and multilayer framework. Scientific Reports. Vol 7: 41676
14Alam, P., Dash, S., Climent, C., Kaur, G., Choudhury, A.R., Casanova, D., Alemany, P., Chowdhury, R., Laskar, I.R. 2017.Aggregation Induced Emission’ Active Iridium(III) Complexes with Applications in Mitochondrial Staining.RSC Advances.Vol 7: 5642-48
15Mukherjee, S., Dash, S., Lohitesh, K., Chowdhury, R. 2017.The dynamic role of autophagy and MAPK signaling in determining cell fate under cisplatin stress. PloS One. 12: e0179203.
16Singh, R.P., Runthala, A., Khan, S., Jha, P.N. 2017. Quantitative proteomics analysis reveals the tolerance of wheat to salt stress in response to Enterobacter cloacae SBP-8. PLoS ONE 12(9): e0183513
17Mishra, S., Chauhan, P., Gupta, S., Raghuvanshi, S., Singh, R., Jha, P.N. 2017. CO2sequestration potential of halo-tolerant bacterium Pseudomonas aeruginosa SSL-4 and its application for recovery of fatty alcohols. Process Safety and Environmental Protection. Vol 111:582-591
18Shukla, P., Sharma, A., Fageria, L., Chowdhury, R. 2017. Novel Spiro/non-Spiro Pyranopyrazoles: eco-Friendly Synthesis, in-vitro Anticancer Activity, DNA binding, and in-silico Docking Studies. Current Bioactive Compounds. Vol 15(2): 257 - 267
19Mehrotra, R., Renganaath, K., Kanodia, H., Loake, G.J., Mehrotra, S. 2017.Towards combinatorial transcriptional engineering. Biotechnology Advances. Vol 35(3):390-405
20Tomar, V., Sidhu, G.S., Nogia, P., Mehrotra, R., Mehrotra, S. 2017. Regulatory components of carbon concentrating mechanisms in aquatic unicellular photosynthetic organisms. Plant Cell Reports. Vol 36(11):1671-1688
21Nogia, P., Tomar, V., Sidhu, G.S., Mehrotra, R., Mehrotra, S. 2017. Relative efficiencies of transient transformation of Arabidopsis thaliana and Nicotiana tabacum upon heterologous expression of membrane proteins. Indian Journal of Biotechnology.Vol.16(2) 195-198
22Shanmugam, B.K., Easwaran, S.N., Lakra, R., Deepa, P.R., Mahadevan, S. 2017.Metabolic pathway and role of individual species in the bacterial consortium for biodegradation of azo dye: A biocalorimetric investigation. Chemosphere. 188: 81-89
23Devi, A., Singhal, A., Gupta, R., Verma, S.K., Singh, A.N. 2017. Utilization of Industrial Waste as a fertilizer in Ornamental Plants. Research Journal of Chemistry and Environment, Vol 21:1-7
24Gudlavalleti, R.H., Bose, S.C., Verma, S.K., Khatri, P., Scaria, J., Dhewa, S., Chaubey, V.K. 2017. A Novel Fluorometric Bio-sensing based Arsenic Detection System for Groundwater. IEEE Sensors Journal. Vol 17 (17) 5391-5398
25Singh, R.P., Jha, P.N. 2017. The PGPR Stenotrophomonas maltophilia SBP-9 augments resistance against biotic and abiotic stress in Wheat Plants. Frontiers in Microbiology. Vol 8:1945
26Sengupta, P., Raman, S., Chowdhury, R., Lohitesh, K., Saini, H., Mukherjee S., Paul A. 2017. Evaluation of apoptosis and autophagy inducing potential of Berberis aristata, Azadirachta indica and their synergistic combinations in parental and resistant human osteosarcoma cells. Frontiers in Oncology. Vol 7:296
27Mishra, S., Chauhan, P., Gupta, S., Raghuvanshi, S., Singh, R., Jha, P.N. 2017. CO2 sequestration potential of halo-tolerant bacterium Pseudomonas aeruginosa SSL-4 and its application for recovery of fatty alcohols. Process Safety and Environmental Protection. Vol 111:582-591
28John, A., Vetrivel, U., Subramanian, K., Deepa, P.R. 2017. Comparative docking of dual conformations in human fatty acid synthase thioesterase domain reveals potential binding cavity for virtual screening of ligands. Journal of Biomolecular Structure and Dynamics. Vol 35(6):1350-1366.
29Sharma, P.K. 2017. Combining Diverse Pedagogical Tools for Effective Teaching of General Biology to a Large Class Comprising of First Year Science and Engineering Undergraduates. Educational Quest. Vol. 8 (2):539-546
30Pradhan, S.K., Panwar, J., Gupta, S. 2017. Enhanced heavy metal removal using silver-yttrium oxide nanocomposites as novel adsorbent system. Journal of Environmental Chemical Engineering.Vol 5: 5801-5814
 
2016:
1Baig, N., Singh, R.P., Jha, P.N., Sah, A.K. 2016. Synthesis of Glucose- Derived Glycoconjugates and Studies on Their Antimicrobial Activities: Mechanistic Insight. Chemistry Select. Vol1(16) :5281–5285
2Singh, R.P., Jha PN. 2016. The multifarious PGPR Serratia marcescens CDP-13 augments induced systemic resistance and enhanced salinity tolerance of wheat (Triticum aestivum L.). PLoS ONE 11: e0155026.
3Singh, R.P., Jha, P.N. 2016. Mitigation of salt stress in wheat plant (Triticum aestivum) by ACC deaminase bacterium Enterobacter sp. SBP-6 isolated from Sorghum bicolor. Acta Physiologiae Plantarum. Vol 38:1-12
4Singh, R.P., Jha, P.N. 2016. Alleviation of salinity-induced damage on wheat plant by an ACC deaminase-producing halophilic bacterium Serratiasp. SL- 12 isolated from salt lake. Symbiosis. Vol 69:101–111
5Tantak, M.P., Gupta, V., Nikhil, K., Arun, V., Singh, R.P., Jha, P.N., Shah, K., Kumar, D. 2016. Sequential one-pot synthesis of bis(indolyl)glyoxylamides:Evaluation of antibacterial and anticancer activities, Bioorganic & medicinal chemistry letters. Vol 26 (13): 3167-3171
6Chander, S., Ashok, P., Singh, R., Jha, P.N., Zheng, Y-T., Wang, P., Murugesan, S. 2016. Rational Design, Synthesis, Anti-HIV-1 RT and Anti-Microbial Activity of Novel 2- (6,7-Dimethoxy-3,4-Dihydroisoquinolin-2(1H)-yl)-N-Phenylpropanamide Derivatives. Anti-Infective Agents. Vol 14, 63-73
7Singh, R.P., Jha, P.N. 2016. A halotolerant bacterium Bacillus licheniformis HSW-16 augments induced systemic tolerance to salt stress in wheat plant (Triticum aestivum). Frontiers in Plant Science. Vol 7: 1890
8Boopathi, P.A., Subudhi, A.K., Middha, S., Acharya, J., Mugasimangalam, R.C., Kochar, S.K., Kochar, D.K., Das, A. 2016. Design, construction and validation of a Plasmodium vivax microarray for the transcriptome profiling of clinical isolates. Acta Tropica. Vol 164: 438-447
9Subudhi, A.K., Boopathi, P.A., Middha, S., Acharya, J., Rao, S.N., Mugasimangalam, R.C., Sirohi, P., Kochar, S.K., Kochar, D.K., Das, A. 2016. A cross strain Plasmodium falciparum microarray optimized for the transcriptome analysis of Plasmodium falciparum patient derived isolates. Genomics Data. Vol 9: 118-125
10Bhargava, A., Jain, N., Khan, M.A., Pareek, V., Dilip, R.V., Panwar, J. 2016. Utilizing metal tolerance potential of soil fungus for efficient synthesis of gold nanoparticles with superior catalytic activity for degradation of rhodamine B. Journal of Environmental Management. Vol 183: 22-32
11Nalini, V., Deepa, P.R., Raguraman, R., Khetan, V., Reddy, M.A., Krishnakumar, S. 2016. Targeting HMGA2 in Retinoblastoma Cells in vitro Using the Aptamer Strategy. Ocular Oncology and Pathology.Vol 2(4):262-269
12John, A., Umashankar, V., Samdani, A., Sangeetha, M., Krishnakumar, S., Deepa, P.R. 2016. In Silico Structure Prediction of Human Fatty Acid Synthase-Dehydratase: A Plausible Model for Understanding Active Site Interactions: Bioinformatics and Biology Insights. Vol (14)10:143-54
13Leelaram, S., Sivanesh, N.E., Surianarayanan, M., Deepa, P.R., Ashwath Balaje, S. 2016. Effect of feeding strategies on inulinase production analyzed in a biocalorimeter. Process Biochemistry. Vol 51: 692-703
14Venkatesan, N., Kanwar, J.R., Deepa, P.R., Navaneethakrishnan, S., Joseph, C., Krishnakumar, S. 2016. Targeting HSP90/Survivin using a cell permeable structure based peptido-mimetic shepherdin in retinoblastoma. Chemico-biological interactions. Vol 252:141- 9
15Venkatesan, N., Kanwar, J., Deepa, P.R., Khetan, V., Crowley, T.M., Raguraman, R., Sugneswari, G., Rishi, P., Natarajan, V., Biswas, J., Krishnakumar, S. 2016. Clinico-Pathological Association of Delineated miRNAs in Uveal Melanoma with Monosomy 3/Disomy 3 Chromosomal Aberrations. PLoS One. 11:e0146128.
16Palvai, S., More, P., Mapara, N., Nagraj, J., Chowdhury, R., Basu, S. 2016. Self-Assembled Oleic Acid Nanoparticle Mediated Targeting of Mitogen Activated Protein Kinase Signaling in Combination with DNA Damage in Cancer Cells. Chem Nano Mat. Vol 2:201-11
17Raghuram, H.S., Pradeep, S., Dash, S., Chowdhury, R., Mazumder, S. 2016. Chitosan encapsulated ZnS:M (M: Fe3+ or Mn2+) quantum dots for fluorescent labeling of sulphate reducing bacteria. Bulletin of Materials Science. Vol 39: 405-413
18Tomar V., Sidhu GK.,Nogia P.,Mehrotra R.,Mehrotra S. 2016. Role of habitat and great oxidation event on the occurrence of three multi-subunit inorganic carbon uptake systems in cyanobacteria, J. Genetics. 95, 109-118.
19Marathe, S.A., Balakrishnan, A., Negi, V.D., Sakorey, D., Chandra, N., Chakravortty, D. 2016. Curcumin reduces the motility of Salmonella enterica serovar Typhimurium by binding to the flagella thereby leading to flagellar fragility and shedding. Journal of Bacteriology. Vol 198: 1798-1811
20Mahapatra, B.B., Marathe, S.A., Meyer-Rochow, V.B., Mishra, M. 2016. A closer look at the feather coloration in the male purple sunbird, Nectarinia asiatica. Micron. Vol 85: 44-50
21Kumar, A., Kaushal, H., Gannavaram, S., Dey, R., Selvapandiyan, A., Ramesh, V., Negi N.S., Dubey, U.S., Nakhasi, H., Salotra, P. 2016.Gene deleted live attenuated Leishmania vaccine candidates against visceral leishmaniasis elicit pro-inflammatory cytokines response in human PBMCs. Scientific Reports. Vol 6: 33059; doi:10.1038/srep33059
22Dubey, B., Dubey, P., Dubey, U.S. 2016. Modeling the intracellular pathogen immune interaction with cure rate. Communications in Nonlinear Science and Numerical Simulation. Vol 38:72-90
23Dubey, B., Dubey, P., Dubey, U.S. 2016. Role of Media and Treatment on an SIR Model. Nonlinear Analysis: Modeling Control. Vol 21 (2): 185-200
24Nakazawa, N., Mehrotra, R., Orie, A., Yanagida, M. 2016. ICRF-193, an anti-cancer Topoisomerase II inhibitor, induces arched telophase spindles that snap, leading to a ploidy increase in fission yeast. Genes to cell. Vol 21:978–993
25Bhalothia, P., Sangwan, C., Alok, A., Mehrotra, S., Mehrotra, R. 2016. PP2C-like Promoter and Its Deletion Variants Are Induced by ABA but Not by MeJA and SA in Arabidopsis thaliana. Frontiers of Plant Science. Vol 7: 547
26Mehrotra, R., Khan Z.H., Mehrotra, S., 2016. Lipase catalysed transesterification. Enzyme Engineering. 5:1
27Nagappan, S., Verma, S.K. 2016. Development of growth model for raceway pond cultivation of Desmodesmussp. MCC34 isolated from local water body. Engineering in Life Sciences. Vol 16: 45-52
28Nagappan, S., Verma, S.K. 2016.The static extraction of lipid from microalgae Desmodesmussp MCC34. Research Journal of Biotechnology.11 80-87
29Pala, Z.R., Saxena, V., Saggu, G.S., Yadav, S.K., Pareek, R.P., Kochar, S.K., Kochar, D.K., Garg, S. 2016. Structural and functional characterization of an iron–sulfur cluster assembly scaffold protein-SufA from Plasmodium vivax. Gene. 585: 159-165
30Saggu, G.S., Pala, Z.R., Garg, S., Saxena,V. 2016.New Insight into Isoprenoids Biosynthesis Process and Future Prospects for Drug Designing in Plasmodium. Frontiers in Microbiology. Vol 7:1421
31Kajla, M., Kakani, P., Choudhury, T.P., Gupta, K., Gupta, L., Kumar, S. 2016. Characterization and expression analysis of gene encoding heme peroxidase HPX15 in major Indian malaria vector Anopheles stephensi (Diptera: culicidae). Acta Tropica. Vol 158:107-16
32Kakani, P., Suman, S., Gupta, L., Kumar, S. 2016. Ambivalent outcomes of cell apoptosis: A barrier or blessing in malaria progression. Frontiers in Microbiology. Vol 7:302
33Gupta, K., Dhawan, R., Kajla, M., Kumar, S., Jnanasiddhy, B., Singh, N.K., Dixit, R., Bihani, A., Gupta, L. 2016. Molecular Identification of Aedes aegypti mosquitoes from Pilani region of Rajasthan, India. Journal of Vector Borne Diseases.Vol 53:149-155
34Kajla, M., Bhattacharya, K., Gupta, K., Banerjee, U., Kakani, P., Gupta, L., Kumar, S. 2016. Identification of the temperature- induced larvicidal efficacy of Agave angustifolia against Aedes, Culex and Anopheles larvae. Frontiers in Public Health. Vol 3:286
35Kaushal, H., Bras-Goncalves, R., Kumar, A., Deep, D.K., Petitdidier, E., Lemesre, J-L., Papierok, G., Kumar, S., Ramesh, V., Salotra, P. 2016. Distinct cellular immunological responses in mono- and polymorphic clinical forms of Post Kala-Azar Dermal Leishmaniasis in India. Clinical and Experimental Immunology. Vol 185:50-60
36Nogia, P., Sidhu, G.S., Tomar, V., Mehrotra, R., Mehrotra, S. 2016. Elucidation of an array of nitrate transporter paralogs in Arabidopsis thaliana genome. Journal of Plant Physiology & Pathology. 4:3
37Dubey, U., Lal, M., Mittal, A., Kapur, S. 2016. Therapeutic potential of camel milk. Emirates Journal of Food and Agriculture. Vol 28(3):164-176
38Singh, S., Verma, S.K. 2016.Synergistic effects of the alkaloids of Prosopis juliflora, causing multiple organ toxicity in mouse model. Journal of Biologically Active Products from Nature. Vol 6 (4):323-336
 
2015:
1Sidhu, G.K., Sharma, R., Mehrotra, R., Mehrotra, S. 2015. Analysis of 39 cyanobacterial species reveals rbcX subunit to be present between L and S Subunits. Journal of Advances in Biology. 7 (3):1420-1426
2Tomar, V., Sidhu, G.K., Nogia, P., Mehrotra, R., Mehrotra, S. 2015. Role of habitat and great oxidation event on the occurrence of the three multi-subunit inorganic carbon uptake systems in cyanobacteria. Journal of Genetics. Vol 95(1):109-18
3Jain, N., Bhargava, A., Rathi, M., Dilip, R.V., Panwar, J. 2015. Removal of protein capping enhances the antibacterial efficiency of biosynthesized silver nanoparticles. Public Library of Science one (PLoS ONE). Vol 10(7):e0134337. doi: 10.1371/journal.pone.0134337
4Jain, N., Alam, P., Laskar, I.R., Panwar, J. 2015. Aggregation induced phosphorescence’ active iridium (III) complexes for integrated sensing and inhibition of bacteria in aqueous solution. RSC Advances. Vol 5: 61983-61988
5Bhargava, A., Jain, N., Gangopadhyay, S. Panwar, J. 2015. Development of gold nanoparticle-fungal hybrid based heterogeneous interface for catalytic applications. Process Biochemistry. Vol 50: 1293-1300
6Jha, P., Panwar, J., Jha, P.N. 2015. Secondary plant metabolites and root exudates: guiding tools for polychlorinated biphenyl biodegradation. International Journal of Environmental Science and Technology. Vol12:789–802
7Subudhi, A.K., Boopathi, P.A., Pandey, I., Kaur, R., Middha, S., Acharya, J., Kochar, S.K., Kochar, D.K., Das, A. 2015. Disease specific modules and hub genes for intervention strategies, A co-expression network based approach for Plasmodium falciparum clinical isolates: Infection, Genetics and Evolution. Vol 35:96–108
8Subudhi, A.K., Boopathi, P.A., Pandey, I., Kohli, R., Karwa, R., Middha, S., Acharya, J., Kochar, S.K., Kochar, D.K., Das, A. 2015. Plasmodium falciparum complicated malaria: Modulation and connectivity between exportome and variant surface antigen gene families. Molecular and Biochemical Parasitology. Vol 201(1):31-46
doi: 10.1016/j.molbiopara.2015.05.005. Epub 2015 May 27.
9Runthala, A. 2015. Non-Linear and misleading template scoring criteria: Root cause of protein modelling inaccuracies. Current Synthetic and Systems Biology. Vol 3(2) 1-5
10Runthala, A. 2015. Functionally tolerable mutations incorporated in proteins guides the evolution process10/10/2017. Journal of Investigative Genomics. Vol 2(4):1-4
11Singh, R.P., Shelke, G.M., kumar, A. and Jha, P.N. 2015. Biochemistry and Genetics of ACC deaminase: A weapon to 'stress ethylene' produced in plants. Frontiers in Microbiology.Vol 6:937
12Singh, R.P., Jha, P., Jha, P.N. 2015. The plant growth promoting Bacterium Klebsiella Sp. SBP-8 confers induced systemic tolerance in wheat (Triticum aestivum) plant under salt stress condition. Journal of plant physiology. Vol 20(184):57-67
13Chander, S., Ashok, P., Singh, S., Jha, P.N., Murugesan, S. 2015. A Rapid, Green, Efficient Microwave-Assisted Synthesis and Antimicrobial Activity of Novel Glycinamide of 6,7-Dimethoxy-1, 2, 3, 4-Tetrahydroisoquinolines. Current Microwave Chemistry. Vol 2 (1):44-52
14Gupta, G., Gupta, A.D., Jha, P.N. 2015. Biocontrolling and Colonization Potential of Pseudomonas aeruginosa PM389 Isolated from Pennisetum Glaucum under Field Conditions. International Journal of Research in Emerging Science and Technology. Vol 2, (3): 104-116
15Khedar, P., Pericherla, K.,Singh. R.P., Jha, P.N., Kumar, A. 2015. Click chemistry inspired synthesis of piperazine-triazole derivatives and evaluation of their antimicrobial activities. Medicinal Chemistry Research. Vol 24(7):3117–3126
16Singh, R.P., Mishra, S.M., Raghuvanshi, S., Jha, P.N. 2015. GC-MS analysis of change in fatty acid composition of halobacterium Bacillus licheniformis HSW-16 under varying salinity condition: Journal of Microbiology Biotechnology and Food Science.Vol 5 (3): 290-292
17Gupta, G., Jha, P.N. 2015. Screening of potential PGPR candidates as future biofertilizers: A strategic approach from lab to field. Research Journal of Biotechnology. Vol 10:48-62
18Mishra, S., Singh, R.P., Raghuvanshi, S., Gupta, S., Jha, P.N. 2015. Deducing the bio-perspective capabilities of Fe (II) utilizing bacterium Pseudomonas aeruginosa KP isolated from extreme environment. Biochemistry & Analical Biochemistry. Vol 4(2):1-5
19Singh, R.P., Jha, P.N. 2015. Plant Growth Promoting Potential of ACC Deaminase Rhizospheric Bacteria Isolated from Aerva javanica: A Plant Adapted to Saline Environments. International Journal of Current microbiology and Applied Sciences. Vol 4(7): 142-152
20Pallavi, B., Sharma, A., Singh, R.P., Jha, P.N., Shukla, P. 2015. Novel grinding synthesis of pyranopyrazole analogues and their evaluation as antimicrobial agents: Heterocycles. Heterocycles. Vol 91(8):1615-1627
21Singh, R.P., Jha, P.N. 2015. Molecular identification and characterization of rhizospheric bacteria for plant growth promoting ability. International Journal of Current Biotechnology, Vol 3(7):12-18
22Prajapat, R., Marwal, A., Jha, P.N. 2015. Erwinia carotovora associated with Potato: A critical appraisal with respect to Indian perspective. International Journal of Current Microbiology and Applied Sciences. Vol 2(10):83-89
23Dhawan, R., Gupta, K., Kajla, M., Kumar, S., Gakhar, S.K., Kakani, P., Choudhury, T.P., Gupta, L. 2015. Molecular characterization of SOCS gene and its expression analysis on Plasmodium berghei infection in Anopheles culicifacies.: Acta Tropica. Vol 152:170-175
24Kajla, M., Bhattacharya, K., Gupta, K., Banerjee, U., Kakani, P., Gupta, L., Kumar S. 2015. Identification of the temperature- induced larvicidal efficacy of Agave angustifolia against Aedes, Culex and Anopheles larvae: Frontiers in Public Health. Vol 3(286):1-11
25Kajla, M., Gupta, K., Gupta, L., Kumar, S. 2015. A Fine-Tuned Management between Physiology and Immunity Maintains the Gut Microbiota in Insects. Biochemistry & Physiology. Vol 4(4) 1-8
26Nagraj, J., Mukherjee, S., Chowdhury, R. 2015. Cancer: an evolutionary perspective. Journal of Cancer Biology and Research, 3(2): 1064
27Shukla, P., Sharma, A., Chowdhury, R., Dash, S., Pallavi, B., 2015. Fast microwave assisted synthesis of pyrazolopyran derivatives as new anticancer agents. Current Microwave Chemistry, 02:1-1
28Pathan, J.S., Martin, A., Chowdhury, R., Sarkar, A., Chakrabarty, D. 2015. Russells viper venom (RVV) affects regulation of small GTPases and causes nuclear damage. Toxicon. Vol 108:216-25
29Kanchan, S., Mehrotra, R., Chowdhury, S. 2015. In silico analysis of the endonuclease III protein family identifies key residues and processes during evolution. Journal of Molecular Evolution.Vol 81:54–67
 
2014:
1Sidhu, G.K., Mehrotra, R., Mehrotra, S. 2014. Carbon concentrating mechanisms: In rescue of Rubisco inefficiency: Acta Physiologia plantarum.Vol 36: 3101-3114
2Mehrotra, R., Jain, V., Chandra Shekhar, Mehrotra, S. 2014. Genome wide analysis of Arabidopsis thaliana reveals high frequency of AAAGN7CTTT motif. Metagene. Vol 2: 606-615
3Nigam, S. Mehrotra, S., Vani, B., Mehrotra, R. 2014. Lipase Immobilization Techniques for Biodiesel Production: An Overview: International Journal of Renewable Energy & Biofuels. Vol. 2014 (2014), Article ID 664708, DOI: 10.5171/2014.664708
4Mehrotra, R., Bhalothia, P., Bansal, P., Basantani, M.K., Bharti, V., Mehrotra, S. 2014. Abscisic acid and abiotic stress tolerance - different tiers of regulation. Journal of Plant Physiology. Vol 171: 486–496
5Kanchan, S., Mehrotra, R., Chowdhury, S. 2014. Evolutionary pattern of four representative DNA repair proteins across six model organisms: An in silico analysis. Network Model. Anal. Health Inform. Bioinform, vol. 3(1). 10.1007/s13721-014-0070-1
6Jain, N., Bhargava, A., Sabat, D., Panwar, J. 2014. Unveiling the potential of metal-tolerant fungal isolate for efficient enzyme production. Process Biochemistry. Vol 49: 1858-1866
7Jain, N., Bhargava, A., Panwar, J. 2014. Enhanced photocatalytic degradation of methylene blue using biologically synthesized “protein-capped” ZnO nanoparticles. Chemical Engineering Journal. Vol 243: 549-555
8Boopathi, P.A., Subudhi, A.K., Garg, S., Middha, S., Acharya, J., Pakalapati, D., Saxena, V., Aiyaz, M., Chand, B., Mugasimangalam, R.C., Kochar, S.K., Sirohi, P., Kochar, D.K., Das A. 2014. Dataset of natural antisense transcripts in P. vivax clinical isolates derived using custom designed strand-specific microarray. Genom Data. Vol 2: 199-201
9Subudhi, A.K., Boopathi, P.A., Garg, S., Middha, S., Acharya, J., Pakalapati, D., Saxena, V., Aiyaz M., Chand B., Mugasimangalam R.C., Kochar, S.K., Sirohi, P., Kochar, D.K., Das, A. 2014. Natural antisense transcripts in Plasmodium falciparum isolates from patients with complicated malaria. Experimental Parasitology. Vol 141: 39-54
10Subudhi, A.K., Boopathi, P.A., Garg, S., Middha, S., Acharya, J., Pakalapati, D., Saxena, V., Aiyaz, M., Chand, B., Mugasimangalam, R.C., Kochar, S.K., Sirohi, P., Kochar, D.K., Das, A. 2014. An in vivo transcriptome data set of natural antisense transcripts from Plasmodium falciparum clinical isolates. Genom Data. Vol 2: 393-395
11Sabharwal, N.S., Runthala, A. 2014. Functional Protein Domains Evolve Very Specifically Over Mutations. Journal of Proteomics and Genomics. Vol 1(1): 102
12Runthala, A., Chowdhury, S. 2014. Iterative Optimal TM_Score and Z_Score Guided Sampling Significantly Improves Model Topology: Lecture Notes in Engineering and Computer Science: Proceedings of The International Multi Conference of Engineers and Computer Scientists, March 12-14, Hong: Kong, DOI: 10.13140/2.1.4584.5443
13Kajla, M., Kakani, P., Choudhary, T.P. , Gupta, K., Dhawan, R., Gakhar, S.K., Gupta, L., Kumar, S. 2014. Characterization of Anopheline unique peroxidase and its role in the regulation of Plasmodium development. Malaria Journal. Vol 13(1): 49
14Palvai, S., Nagraj, J., Mapara, N., Chowdhury, R., Basu, S. 2014. Dual drug loaded vitamin D3 nanoparticle to target drug resistance in cancer. RSC Advances. Vol 4: 57271-57281
15Pasha, S., Alam, P., Dash, S., Kaur, G., Banerjee, D., Chowdhury, R., Rath, N., Choudhury, R.A., Laskar, I.R.2014. Rare observation of 'aggregation induced emission'in cyclometalated platinum (ii) complexes and their biological activities. RSC Advances. Vol 4: 50549-50553
16Chowdhury, R., Karak, P., Sen, A.K., Chatterjee, R., Chaudhuri, K. 2014. Arsenic extrusion and energy derivation as survival mechanism in a novel Exiguobacterium isolated from arsenic contaminated groundwater of West Bengal. American International Journal of Research in Formal, Applied and Natural Sciences (AIJRFANS). Vol 14(318): 19-27
17Kochar, D.K., Das, A., Kochar, A., Middha, S., Acharya, J., Tanwar, G.S., Pakalapati, D., Subudhi, A.K., Boopathi, P.A., Garg, S., Kochar, S.K. 2014. A prospective study on adult patients of severe malaria caused by Plasmodium falciparum, Plasmodium vivax and mixed infection from Bikaner, northwest India. Journal of Vector Borne Diseases. Vol 51(3):200-10.
18Pareek, R.P., Kannan, M. 2014. Prevalence of H. pylori Infection in Type 2 Diabetes mellitus patients in Rural Rajasthan: A Case Control Study. International Journal of Medical Science and Clinical Invention. Vol 1(1)
19Li, J., Kannan, M., Trivett, A.L., Liao, H., Wu, X., Akagi, K., Symer, D.E. 2014. An antisense promoter in mouse L1 retrotransposon open reading frame-1 initiates expression of diverse fusion transcripts and limits retrotransposition: Nucleic Acids Research. Vol 42(7):4546-62
20Sarwa, P., Verma S.K. 2014. Recovery and recycling of Zn (II) from waste water by Scenedesmus sp. MCC 26 isolated from heavy metal contaminated site. Clean-Soil, Air Water. Vol 42 (9): 1298-1303

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