BITS Pilani

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Publications

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Publications

Publications

Papers in Peer-Reviewed Journals:

  • Amit K Subudhi, Boopathi P Arunachalam, Shilpi Garg, Sheetal Middha, Jyoti Acharya, Deepak Pakalapati, Vishal Saxena, Aiyaz Mohammed, Harsha B Orekondy, Raja C Mugasimangalam, Paramendra Sirohi, Sanjay K Kochar, Dhanpat K Kochar (2014). An in vivo transcriptome data set of natural antisense transcripts from Plasmodium falciparum clinical isolates. Genomics Data, 2; 393-395
  • D.K. Kochar, Ashis Das, Abhishek Kochar, Sheetal Middha, Jyoti Acharya, G.S. Tanwar, Deepak Pakalapati, Amit Kumar Subudhi, P.A. Boopathi, Shilpi Garg, and S.K. Kochar, (2014). A prospective study on adult patients of severe malaria caused by Plasmodium falciparum, P. vivax and mixed infection from Bikaner, northwest India J Vector Borne Dis 51, (3), 200-210
  • P.A. Boopathi, Amit Kumar Subudhi, Shilpi Garg, Sheetal Middha, Jyoti Acharya, Deepak Pakalapati, Vishal Saxena, Mohammed Aiyaz, Bipin Chand, Raja C. Mugasimangalam, Sanjay K. Kochar, Parmendra Sirohi, Dhanpat K. Kochar, Ashis Das (2014). Dataset of natural antisense transcripts in P. vivax clinical isolates derived using custom designed strand-specific microarray, Genomics Data, 2; 199-201
  • Amit K Subudhi, Boopathi P Arunachalam, Shilpi Garg, Sheetal Middha, Jyoti Acharya, Deepak Pakalapati, Vishal Saxena, Aiyaz Mohammed, Harsha B Orekondy, Raja C Mugasimangalam, Paramendra Sirohi, Sanjay K Kochar, Dhanpat K Kochar (2014). Natural antisense transcripts in Plasmodium falciparum isolates from patients with complicated malaria, Experimental Parasitology, 141: 39-54.
  • P.A. Boopathi, Amit Kumar Subudhi, Shilpi Garg, Sheetal Middha, Jyoti Acharya, Deepak Pakalapati, Vishal Saxena, Mohammed Aiyaz, Bipin Chand, Raja C. Mugasimangalam, Sanjay K. Kochar, Parmendra Sirohi, Dhanpat K. Kochar, Ashis Das (2013). Revealing natural antisense transcripts from Plasmodium vivax isolates: Evidence of genome regulation in complicated malaria, Infection, Genetics and Evolution, 20: 428-443
  • Deepak Pakalapati, Shilpi Garg, Sheetal Middha, Jyothi Acharya, Amit K. Subudhi, P. A. Boopathi, S. K. Kochar, Vishal Saxena, D. K. Kochar, Ashis Das (2013). Development and evaluation of a 28S rRNA gene based nested PCR assay for the detection of Plasmodium falciparum and Plasmodium vivax. Pathogens and Global Health , 107(4):180-188.
  • Deepak Pakalapati, Shilpi Garg, Sheetal Middha, Abhishek Kochar, Amit K. Subudhi, P. A. Boopathi, S. K. Kochar, Vishal Saxena, R.P. Pareek, Jyoti Acharya, D. K. Kochar, Ashis Das (2013). Comparative evaluation of microscopy, OptiMAL ® and 18S rRNA gene based multiplex PCR for detection of Plasmodium falciparum and Plasmodium vivax from field isolates of Bikaner, India. Asian Pacific Journal of Tropical Medicine, 6 (5): 346 - 351.
  • Gajanand Singh Tanwar, P.C. Khatri, C.K. Chahar, G.S. Sengar, Abhishek Kochar, Gayatri Tanwar, Shaifali Chahar, Nimish Khatri, Sheetal Middha, Jyoti Acharya, S.K. Kochar, Deepak Pakalapati, Shilpi Garg, Ashis Das, D.K. Kochar (2012). Thrombocytopenia in childhood malaria with special reference to P. vivax monoinfection: A study from Bikaner (Northwestern India). Platelets,  23, (3), 211-216
  • Shilpi Garg, Vishal Saxena, Vanshika Lumb, Deepak Pakalapati, Amit Kumar Subudhi, P.A. Boopathi, Shibashis Choudhary, Sanjay K. Kochar, Dhanpat K. Kochar, Y.D.Sharma,  Ashis Das (2012). Novel mutations in the antifolate drug resistance marker genes among parasite isolates from severe Plasmodium vivax malaria group of patients.  Experimental Parasitology 132, 410-416.
  • Vishal Saxena, Shilpi Garg, Jyotsna Tripathi, Sonal Sharma, Deepak Pakalapati, Amit K. Subudhi, P. A. Boopathi , Gagandeep Singh Saggu, Sanjay Kochar , Dhanpat K. Kochar,  Ashis Das. (2012). Plasmodium vivax Apicoplast genome: A Comparative analysis of major genes from Indian field isolates.”Acta Tropica 122, 138-149.
  • G. S. Tanwar, P. C. Khatri, G. S. Sengar, A. Kochar, S. K. Kochar, S. Middha, G. Tanwar, N. Khatri, D. Pakalapati, Shilpi Garg, A. Das & D. K. Kochar (2011)  "Clinical profiles of 13 children with Plasmodium vivax cerebral malaria" Annals of Tropical Paediatrics 31, 351–356.
  • Dhanpat Kumar Kochar, Gajanand Singh Tanwar, Poonam Chand Khatri, Sanjay Kumar Kochar, Ghanshyam Singh Sengar, Anjana Gupta, Abhishek Kochar, Sheetal Middha, Jyoti Acharya, Vishal Saxena, Deepak Pakalapati, Shilpi Garg, and Ashish Das (2010). Clinical Features of Children Hospitalized with Malaria—A Study from Bikaner, Northwest India. Am. J. Trop. Med. Hyg., 83(5), 981-989.
  • Dhanpat Kochar, Abhishek Kochar, Sheetal Middha, Jyoti Acharya, Gajanand Tanwar, Deepak Palakapati, Shilpi Garg, Vishal Saxena, Amit Subudhi, P. Boopathi, Ashis Das, Sanjay Kochar (2010). Thrombocytopenia in Plasmodium falciparum, Plasmodium vivax and Mixed Infection Malaria: A Study from Bikaner (Northwestern India). Platelets, 21(8):623-7.
  • Shilpi Garg, Vishal Saxena, Swarna Kanchan, Pooja Sharma, Siddarth Mahajan, Dhanpat Kochar, Ashis Das (2009). Novel point mutations in Sulfadoxine resistance genes of Plasmodium falciparum from India. Acta Tropica 110, 75 - 79.
  • Pragyan Acharya., Rani Pallavi., Syama Chandran., Harshini Chakravarti., Sheetal Middha., Jyoti Acharya., Sanjay Kochar., Dhanpat Kochar., Amit Subudhi., Arun P Boopathi., Shilpi Garg., Ashis Das and Utpal Tatu (2009). A glimpse into the clinical proteome of human malaria parasites Plasmodium falciparum and Plasmodium vivax. Proteomics - Clinical Applications 3, 1314-1325. (Editor’s choice in Science) (Impact Factor: 1.514)
  • Dhanpat K. Kochar, Ashis Das, Sanjay K. Kochar, Vishal Saxena, Parmendra Sirohi, Shilpi Garg, Abhishek Kochar, Mahesh P. Khatri, AND Vikas Gupta (2009) Severe Plasmodium vivax Malaria: A Report on Serial Cases from Bikaner in Northwestern India. Am. J. Trop. Med. Hyg.  80: 194-198.
  • Vishal Saxena, Shilpi Garg, Sarita Ranjan, Dhanpat Kochar, Akash Ranjan, Ashis Das. (2007) Analysis of elongation factor Tu (tuf A) of apicoplast from Indian Plasmodium vivax isolates. Infection, Genetics and Evolution, 7: 618–626.
  •  Presentations in Conferences/ Symposium
        Invited Talks:

  • Shilpi Garg (2014): Drug Resistance in Severe Plasmodium vivax malaria: Special emphasis on Bikaner, Rajasthan. Delivered in National Conference on " Recent Trends and Future Prospects of Microbiology and Biotechnology organized by Department of Biosciences, Shri JJT University, Jhunjhunun, Rajasthan from 3rd to 4th March 

Paper Presentations:

  • Shilpi Garg (2013): Prevalence of Drug Resistance Associated Mutations in Clinical Isolates of Plasmodium falciparum and Plasmodium vivax from Bikaner, Rajasthan. Presented in XII International Conference on Vector and Vector Borne Diseases organised by Department of Zoology, Mohan Lal Sukhadia University, Udaipur, Rajasthan and National Academy of Vector Borne Diseases, Bhubaneswar from September 16-18
  • Shilpi Garg (2010): Novel point mutations in the antifolate drug resistance genes among Plasmodium falciparum and Plasmodium vivax isolates. Presented in 5th Indo- Japan International Symposium on “Innovative Molecular Approaches in Global Health Research”, Biyani group of girls college from September 20-22
  • Shilpi Garg (2009). : Novel Point Mutations in Dihydropteroate Synthase Gene of Plasmodium falciparum. Presented at National Conference on “Emerging Trends in Life Sciences Research” BITS –Pilani in March  2009 

Poster Presentations:

  • Shilpi Garg, Vishal Saxena, Zarna Pala,Gagandeep S. Saggu, S.K. Kochar, Dhanpat Kochar, and Ashis Das (2014). Characterization of putative and hypothetical proteins involved in Fe-S cluster biogenesis in Plasmodium vivax; In 12th International Conference on Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases. December 11-13, 2014 at The Royal River Hotel, Bangkok organized by Elsevier
  • Shilpi Garg, Zarna Pala,Gagandeep S. Saggu, S.K. Kochar, R.P.Pareek, Dhanpat Kochar, Ashis Das and Vishal Saxena, (2014). Characterization Of Major Components Of Fe-S Cluster Biogenesis In Plasmodium vivax; in TROPACON 2014 organized by Regional Medical and Research Centre Dibrugarh from 20-22 Nov. 2014
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Ashis Das (2013) Novel point mutations in the antifolate drug resistance marker genes among Plasmodium vivax isolates exhibiting severe manifestations. Presented in Advances in Plasmodium vivax malaria research held at Cosmocaixa, Barcelona, Spain from May 28th to May 29th
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Ashis Das (2011). Novel Point mutations in the antifolate drug resistance genes among Plasmodium falciparum and Plasmodium vivax isolates from India. Presented in 22nd Annual Molecular Parasitology Meeting at Marine Biological Laboratory, Woods hole, MA, USA from Sept. 11th to 15th.
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Sanjay K. Kochar, Ashis Das, (2010).  Molecular surveillance of drug resistance marker genes in Plasmodium vivax isolates causing severe manifestations from India. Presented at EMBO - Global Exchange Lecture Course on "Molecular and Evolutionary Genetics of Malaria", held at the National Institute of Malaria Research (NIMR), New Delhi, from Nov. 21 to Dec. 4.
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Ashis Das (2010). Molecular surveillance of drug resistance marker genes in Plasmodium vivax isolates causing severe manifestations from India. Abstract published in American Journal of Tropical Medicine and Hygiene, Vol. 83, November, Suppl. 5. (Supplementary edition ASTMH 59th Annual Meeting at Atlanta, Georgia, USA)
  • Shilpi Garg, Vishal Saxena, Ashis Das (2008) Analysis of Dihydrofolate Reductase (dhfr) and Dihydropteroate Synthase (dhps) genes in Plasmodium falciparum and Plasmodium vivax from Bikaner, Rajasthan. Presented in International Conference on the Interface of Chemistry-Biology in Biomedical Research (ISCBC-2008), at BITS, Pilani from February 22 – 24.
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Ashis Das (2007). Analysis of drug resistance genes in P.falciparum and P.vivax from Bikaner, Rajasthan. Presented in International Symposium on Phycology & Environmental Biotechnology, BITS, Pilani; Oct 29–31.
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Ashis Das (2007). Analysis of drug resistance genes in P.falciparum and P.vivax from Bikaner, Rajasthan. Presented in International Symposium on Molecular Epidemiology and Immunology of Malaria and other Vector borne diseases, RMRCT Jabalpur, M.P. October 16 -19, Pg. 91.
  • Shilpi Garg, Vishal Saxena, Vidya Rajesh, Dhanpat K. Kochar, Ashis Das (2007). Plasmodium vivax – Severe Manifestations. Presented in 33rd Indian Immunology Society Conference, Department of Biochemistry, AIIMS, Jan. 28 – 31, New Delhi, Pg. 104.
  • Shilpi Garg, Vishal Saxena, Vidya Rajesh, Ananias Escalante, Dhanpat K. Kochar, Ashis Das (2006). Genetic analysis of Plasmodium vivax isolates from severe malaria cases. Presented in National Symposium on Tribal Health, RMRCT Jabalpur, October 19 – 20, Pg. 14
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Akash Ranjan, Ashis Das (2005). Characterization of Dihydrofolate reductase gene of P.vivax severe malaria cases. Presented in International Conference on Malaria, organized by National Institute of Malaria (ICMR) and NVBDCP, Delhi and MMV, Geneva at New Delhi, Nov. 4-6, Pg. 243.
  • Shilpi Garg, Vishal Saxena, Dhanpat K. Kochar, Akash Ranjan, Ashis Das (2005). Severe malaria caused by Plasmodium vivax with type 1 CSP repeats. Presented in International Conference on Malaria, organized by National Institute of Malaria (ICMR) and NVBDCP, Delhi and MMV, Geneva at New Delhi, Nov. 4-6, Pg. 28. 

 

 

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